MLOC_81185 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.18269.772518.1457110.3124
LEAShoots from the seedlings (10 cm shoot stage)3.859311.92321.462011.94024
INF1Young developing inflorescences (5mm)0.2834280.2752360.1582220.222428
INF2Developing inflorescences (1-1.5 cm)0.4578270.5834650.6804630.63729
ROORoots from the seedlings (10 cm shoot stage)12.590511.57085.8655512.0108
NODDeveloping tillers at six leaf stage, 3rd internode1.216344.870881.317569.41521
CAR5Developing grain, bracts removed (5 DPA)0.324150.2867880.2569030.290797
CAR15Developing grain, bracts removed (15 DPA)0.03131120.01864010.02270080.0669976



CDS Structure of MLOC_81185






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_81185.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357208NoneNoneNoneNone
MLOC_81185.2CUST_6823_PI427708080AvailableAvailablecontig_94964 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g06820.1 +2 0.0 699 409/488 (84%) 13111.m00691 protein transmembrane amino acid transporter protein, putative, expressed
TAIR PP10 AT1G77690.1 +2 0.0 662 373/483 (77%) | Symbols: LAX3 | like AUX1 3 | chr1:29201232-29203317 REVERSE LENGTH=470