MLOC_8115 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.0412480.036463400.0461794
LEAShoots from the seedlings (10 cm shoot stage)0.1129670.4737520.6656090.339715
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)00.02812200.0460612
ROORoots from the seedlings (10 cm shoot stage)00.044050100.18678
NODDeveloping tillers at six leaf stage, 3rd internode0.3579820.4578950.6704591.36069
CAR5Developing grain, bracts removed (5 DPA)0.6489620.3760810.6249780.553134
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_8115






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_8115.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_8115.1CUST_16815_PI427708080AvailableAvailablecontig_141204 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g15170.1 +1 0.0 717 344/423 (81%) 13106.m01678 protein 3-ketoacyl-CoA synthase, putative, expressed
TAIR PP10 AT1G68530.1 +1 0.0 541 265/422 (63%) | Symbols: CUT1, POP1, CER6, G2, KCS6 | 3-ketoacyl-CoA synthase 6 | chr1:25712881-25714733 REVERSE LENGTH=497