- Predicted Gene MLOC_81109
MLOC_81109 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_81109_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_81109_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.72925 | 5.95117 | 6.59209 | 5.11486 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 402.912 | 425.315 | 476.619 | 351.866 |
INF1 | Young developing inflorescences (5mm) | 5.05787 | 1.74683 | 3.10187 | 2.80568 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.11134 | 1.15819 | 1.87089 | 1.46116 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.28451 | 5.30159 | 17.4111 | 6.7528 |
NOD | Developing tillers at six leaf stage, 3rd internode | 715.84 | 525.974 | 837.843 | 1747.1 |
CAR5 | Developing grain, bracts removed (5 DPA) | 42.9751 | 42.4351 | 36.5031 | 40.3548 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.64869 | 2.30537 | 2.542 | 4.97857 |
CDS Structure of MLOC_81109
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_81109.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g52240.1 |
-1 |
1e-168 |
478 |
231/254 (91%) |
13101.m05463 protein chlorophyll A-B binding protein, putative, expressed |
TAIR PP10 |
AT2G34420.1 |
-1 |
2e-159 |
454 |
226/255 (89%) |
| Symbols: LHB1B2, LHCB1.5 | photosystem II light harvesting complex gene B1B2 | chr2:14522716-14523513 REVERSE LENGTH=265 |