MLOC_81077 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.6481460.4751360.7093120.453501
LEAShoots from the seedlings (10 cm shoot stage)0.4063720.8585410.6176770.398568
INF1Young developing inflorescences (5mm)1.744431.869452.547381.23444
INF2Developing inflorescences (1-1.5 cm)3.336232.304143.110252.46588
ROORoots from the seedlings (10 cm shoot stage)0.5363360.6247750.5232390.544728
NODDeveloping tillers at six leaf stage, 3rd internode0.4126220.3961160.8443581.19494
CAR5Developing grain, bracts removed (5 DPA)1.279121.315831.297950.937617
CAR15Developing grain, bracts removed (15 DPA)0.4478810.1973790.2862050.595883



CDS Structure of MLOC_81077






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_81077.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_81077.3CUST_10825_PI427708083AvailableAvailablecontig_94324 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g59560.1 +2 5e-26 89 41/51 (80%) 13104.m06284 protein tubulin folding cofactor B, putative, expressed
TAIR PP10 AT3G10220.1 +2 5e-21 87 38/51 (75%) tubulin folding cofactor B | chr3:3161977-3164037 FORWARD LENGTH=243