MLOC_81064 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.2358611.9649.4654711.2521
LEAShoots from the seedlings (10 cm shoot stage)4.819070.8070210.9783672.06679
INF1Young developing inflorescences (5mm)29.669625.92218.803422.7331
INF2Developing inflorescences (1-1.5 cm)14.890823.858116.374523.1979
ROORoots from the seedlings (10 cm shoot stage)1.086434.878283.773726.21432
NODDeveloping tillers at six leaf stage, 3rd internode0.08253050.1359910.0763560.508771
CAR5Developing grain, bracts removed (5 DPA)10.12410.656411.804311.8236
CAR15Developing grain, bracts removed (15 DPA)0.5662040.3723030.9758611.40187



CDS Structure of MLOC_81064






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_81064.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372055NoneNoneNoneNone
MLOC_81064.1CUST_18492_PI427708080AvailableAvailablecontig_94281 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g33040.1 -3 0.0 1571 828/942 (88%) 13101.m03335 protein kinesin motor domain containing protein, expressed
TAIR PP10 AT1G18370.1 -3 0.0 1110 615/965 (64%) | Symbols: HIK, ATNACK1, NACK1 | ATP binding microtubule motor family protein | chr1:6319732-6323820 REVERSE LENGTH=974