MLOC_80998 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.336495.179325.604975.84065
LEAShoots from the seedlings (10 cm shoot stage)5.9012.869446.55754.40656
INF1Young developing inflorescences (5mm)10.031112.405712.724810.4736
INF2Developing inflorescences (1-1.5 cm)21.372120.081419.871222.5845
ROORoots from the seedlings (10 cm shoot stage)9.497677.17026.77238.82372
NODDeveloping tillers at six leaf stage, 3rd internode4.6666112.806816.712139.8901
CAR5Developing grain, bracts removed (5 DPA)12.128812.31211.181711.5974
CAR15Developing grain, bracts removed (15 DPA)3.654393.023293.184757.93906



CDS Structure of MLOC_80998






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK358867
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358867CUST_20024_PI427708080NoneNoneNone
MLOC_51877.1NoneAvailableNonecontig_371282 (Not mapped)
MLOC_54411.1NoneAvailableNonecontig_39116 (Mapped)
MLOC_80998.1NoneAvailableAvailablecontig_93981 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----