- Predicted Gene MLOC_80996
MLOC_80996 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_80996_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_80996_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 5.08787 | 6.71124 | 5.80329 | 6.34476 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.83871 | 2.92939 | 3.24145 | 3.32112 |
INF1 | Young developing inflorescences (5mm) | 18.6236 | 20.0118 | 23.0076 | 17.6054 |
INF2 | Developing inflorescences (1-1.5 cm) | 19.3767 | 21.0251 | 19.5996 | 22.5962 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.69618 | 5.5708 | 4.189 | 6.69941 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.2533 | 2.62859 | 5.06283 | 10.9895 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.75762 | 7.46528 | 8.08006 | 7.50837 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.63435 | 1.0746 | 1.36569 | 3.17104 |
CDS Structure of MLOC_80996
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_80996.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g54340.1 |
+3 |
0.0 |
1053 |
548/641 (85%) |
13104.m05619 protein double-strand break repair protein MRE11, putative, expressed |
TAIR PP10 |
AT5G54260.1 |
+3 |
0.0 |
882 |
447/606 (74%) |
| Symbols: MRE11, ATMRE11 | DNA repair and meiosis protein (Mre11) | chr5:22032702-22037749 FORWARD LENGTH=720 |