MLOC_80983 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.832417.59458.50566.95213
LEAShoots from the seedlings (10 cm shoot stage)8.638936.352137.447295.87769
INF1Young developing inflorescences (5mm)7.560848.339788.585576.48832
INF2Developing inflorescences (1-1.5 cm)7.479887.753017.343257.54037
ROORoots from the seedlings (10 cm shoot stage)9.099297.377498.948548.29031
NODDeveloping tillers at six leaf stage, 3rd internode9.246523.163737.3814310.4655
CAR5Developing grain, bracts removed (5 DPA)7.377056.838738.35026.57375
CAR15Developing grain, bracts removed (15 DPA)6.359985.519417.0822613.4238



CDS Structure of MLOC_80983






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_80983.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_80983.1CUST_13417_PI427708083AvailableAvailablecontig_9393 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g46160.1 -2 5e-73 240 116/128 (91%) 13107.m04859 protein MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
TAIR PP10 AT3G03740.1 -2 2e-58 201 94/123 (76%) | Symbols: ATBPM4, BPM4 | BTB-POZ and MATH domain 4 | chr3:937106-939807 REVERSE LENGTH=465