- Predicted Gene MLOC_80902
MLOC_80902 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_80902_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_80902_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 15.9012 | 20.2813 | 19.7014 | 20.3226 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.97683 | 0.781359 | 0.556603 | 0.918207 |
INF1 | Young developing inflorescences (5mm) | 46.8069 | 35.7307 | 39.4024 | 37.0427 |
INF2 | Developing inflorescences (1-1.5 cm) | 200.528 | 185.866 | 162.144 | 222.578 |
ROO | Roots from the seedlings (10 cm shoot stage) | 18.594 | 11.9863 | 22.7328 | 16.4737 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.80091 | 0.78194 | 0.634055 | 2.0363 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.1927 | 1.70672 | 1.35227 | 1.59352 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.06439 | 1.06455 | 4.98565 | 6.05956 |
CDS Structure of MLOC_80902
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_80902.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g52680.1 |
+1 |
6e-81 |
246 |
135/152 (89%) |
13101.m05516 protein OsMADS32 - MADS-box family gene with MIKCc type-box, expressed |
TAIR PP10 |
AT5G20240.1 |
+1 |
8e-20 |
86 |
52/140 (37%) |
| Symbols: PI | K-box region and MADS-box transcription factor family protein | chr5:6829203-6831208 FORWARD LENGTH=208 |