MLOC_80894 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.269782.717922.648352.25573
LEAShoots from the seedlings (10 cm shoot stage)1.974451.141520.9477671.17979
INF1Young developing inflorescences (5mm)4.467544.029523.430753.24705
INF2Developing inflorescences (1-1.5 cm)5.028074.761564.557855.16777
ROORoots from the seedlings (10 cm shoot stage)0.9585641.690371.668061.88107
NODDeveloping tillers at six leaf stage, 3rd internode1.991672.119562.129517.09437
CAR5Developing grain, bracts removed (5 DPA)3.076473.166324.256663.27467
CAR15Developing grain, bracts removed (15 DPA)0.3780530.5384140.5554721.04335



CDS Structure of MLOC_80894






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_80894.7
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_80894.7CUST_16791_PI427708080AvailableAvailablecontig_93403 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g36150.1 -2 0.0 699 361/467 (77%) 13107.m03708 protein formin-like protein 3 precursor, putative, expressed
TAIR PP10 AT5G54650.2 -2 1e-160 508 275/482 (57%) | Symbols: Fh5, ATFH5 | formin homology5 | chr5:22197856-22201649 REVERSE LENGTH=900