- Predicted Gene MLOC_80892
MLOC_80892 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 167.764 | 113.142 | 118.606 | 122.409 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 153.612 | 158.101 | 221.128 | 132.394 |
| INF1 | Young developing inflorescences (5mm) | 248.705 | 251.77 | 286.225 | 226.532 |
| INF2 | Developing inflorescences (1-1.5 cm) | 232.987 | 298.149 | 306.703 | 305.983 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 329.957 | 218.639 | 273.308 | 248.372 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 104.01 | 173.006 | 192.372 | 415.203 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 88.0017 | 103.984 | 94.875 | 94.3454 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 21.4633 | 21.4882 | 21.2251 | 52.1743 |
CDS Structure of MLOC_80892
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_80892.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g36140.1 |
+2 |
2e-41 |
145 |
94/95 (99%) |
13107.m24468 protein core histone H2A/H2B/H3/H4, putative, expressed |
| TAIR PP10 |
AT5G54640.1 |
+2 |
1e-40 |
142 |
92/95 (97%) |
| Symbols: HTA1, RAT5, ATHTA1 | Histone superfamily protein | chr5:22196540-22197279 FORWARD LENGTH=130 |