MLOC_80888 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.140722.313993.084310
LEAShoots from the seedlings (10 cm shoot stage)7.467455.959422.555790
INF1Young developing inflorescences (5mm)4.290893.928976.572710
INF2Developing inflorescences (1-1.5 cm)3.035492.689562.268450
ROORoots from the seedlings (10 cm shoot stage)2.49242.674044.832220
NODDeveloping tillers at six leaf stage, 3rd internode10.60753.405257.934460
CAR5Developing grain, bracts removed (5 DPA)5.593993.024095.391640
CAR15Developing grain, bracts removed (15 DPA)2.133551.574931.775910



CDS Structure of MLOC_80888






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK364920
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364920CUST_24839_PI427708080NoneNoneNone
MLOC_24871.1NoneAvailableNonecontig_1659281 (Not mapped)
MLOC_30141.1NoneAvailableAvailablecontig_2068549 (Not mapped)
MLOC_33632.1NoneAvailableNonecontig_2390965 (Not mapped)
MLOC_77169.1NoneAvailableNonecontig_746093 (Not mapped)
MLOC_80888.1NoneAvailableNonecontig_933843 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----