MLOC_80865 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8317580.8255831.156130.62679
LEAShoots from the seedlings (10 cm shoot stage)0.8650510.5168790.2726060.392581
INF1Young developing inflorescences (5mm)3.644622.888153.403031.96045
INF2Developing inflorescences (1-1.5 cm)3.404922.769171.661232.31444
ROORoots from the seedlings (10 cm shoot stage)0.3376310.96737600.97661
NODDeveloping tillers at six leaf stage, 3rd internode0.08827920.08946550.4221410.344759
CAR5Developing grain, bracts removed (5 DPA)0.5487051.393380.834040.63591
CAR15Developing grain, bracts removed (15 DPA)0.2085790.1050110.4572740.391534



CDS Structure of MLOC_80865






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_80865.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_80865.1CUST_13411_PI427708083AvailableAvailablecontig_932491 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g72049.2 -3 5e-18 84 39/48 (81%) 13101.m07849 protein retrotransposon, putative, centromere-specific, expressed
TAIR PP10None-----