MLOC_80844 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.435871.284011.141861.47474
LEAShoots from the seedlings (10 cm shoot stage)0.4509170.6264040.1117750.348095
INF1Young developing inflorescences (5mm)0.8306220.8200550.6508680.734459
INF2Developing inflorescences (1-1.5 cm)0.5503230.6748290.9041150.861845
ROORoots from the seedlings (10 cm shoot stage)2.43251.879261.660122.55504
NODDeveloping tillers at six leaf stage, 3rd internode0.9707451.158280.4965193.16893
CAR5Developing grain, bracts removed (5 DPA)0.061668000.112366
CAR15Developing grain, bracts removed (15 DPA)0.0692778000.245062



CDS Structure of MLOC_80844






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_80844.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_80844.1CUST_16788_PI427708080AvailableAvailablecontig_93135 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g46350.1 -1 3e-91 281 181/245 (74%) 13104.m04661 protein homeobox associated leucine zipper, putative, expressed
TAIR PP10 AT4G16780.1 -1 1e-61 204 100/117 (85%) | Symbols: ATHB-2, HAT4, ATHB2, HB-2 | homeobox protein 2 | chr4:9449291-9450604 FORWARD LENGTH=284