- Predicted Gene MLOC_80818
MLOC_80818 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_80818_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_80818_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 1.51536 | 2.24607 | 2.12864 | 1.8739 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 16.4137 | 19.29 | 15.8121 | 13.9698 |
INF1 | Young developing inflorescences (5mm) | 8.03987 | 7.08285 | 8.52219 | 6.03517 |
INF2 | Developing inflorescences (1-1.5 cm) | 15.7265 | 14.4928 | 14.2199 | 15.0246 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.792374 | 1.53797 | 1.10094 | 1.57836 |
NOD | Developing tillers at six leaf stage, 3rd internode | 13.4577 | 19.7388 | 19.4334 | 63.6698 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.67219 | 4.02869 | 4.52354 | 3.89523 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.816647 | 0.72331 | 0.621438 | 1.55049 |
CDS Structure of MLOC_80818
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_80818.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g32650.1 |
+2 |
0.0 |
1067 |
520/572 (91%) |
13104.m03133 protein tRNA synthetase class II core domain containing protein, expressed |
TAIR PP10 |
AT1G29880.1 |
+2 |
0.0 |
922 |
450/566 (80%) |
glycyl-tRNA synthetase / glycine--tRNA ligase | chr1:10459662-10462781 REVERSE LENGTH=729 |