- Predicted Gene MLOC_80817
MLOC_80817 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_80817_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_80817_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.952338 | 1.532 | 1.63382 | 1.93226 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.35057 | 0.684776 | 1.32236 | 1.48661 |
INF1 | Young developing inflorescences (5mm) | 2.2189 | 1.84173 | 1.72889 | 2.17173 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.77817 | 2.17929 | 2.75955 | 3.48284 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.76124 | 1.78638 | 1.84354 | 2.87571 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.55268 | 0.640879 | 0.814656 | 2.59943 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.08278 | 1.63795 | 2.14311 | 2.4757 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.38685 | 2.57893 | 2.98478 | 9.4095 |
CDS Structure of MLOC_80817
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_80817.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g06190.1 |
-1 |
9e-58 |
124 |
64/73 (88%) |
13106.m00633 protein uncharacterized protein ycf45, putative, expressed |
TAIR PP10 |
AT1G73170.1 |
-1 |
1e-54 |
120 |
59/73 (81%) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:27511722-27514783 REVERSE LENGTH=666 |