MLOC_80817 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.9523381.5321.633821.93226
LEAShoots from the seedlings (10 cm shoot stage)2.350570.6847761.322361.48661
INF1Young developing inflorescences (5mm)2.21891.841731.728892.17173
INF2Developing inflorescences (1-1.5 cm)2.778172.179292.759553.48284
ROORoots from the seedlings (10 cm shoot stage)1.761241.786381.843542.87571
NODDeveloping tillers at six leaf stage, 3rd internode1.552680.6408790.8146562.59943
CAR5Developing grain, bracts removed (5 DPA)2.082781.637952.143112.4757
CAR15Developing grain, bracts removed (15 DPA)4.386852.578932.984789.4095



CDS Structure of MLOC_80817






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_80817.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_80817.1CUST_10793_PI427708083AvailableAvailablecontig_92922 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g06190.1 -1 9e-58 124 64/73 (88%) 13106.m00633 protein uncharacterized protein ycf45, putative, expressed
TAIR PP10 AT1G73170.1 -1 1e-54 120 59/73 (81%) P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:27511722-27514783 REVERSE LENGTH=666