- Predicted Gene MLOC_80801
MLOC_80801 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_80801_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_80801_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 20.6008 | 21.6582 | 20.4228 | 20.5297 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 21.3611 | 16.3868 | 12.5989 | 13.2585 |
INF1 | Young developing inflorescences (5mm) | 23.7129 | 26.7328 | 28.436 | 22.9219 |
INF2 | Developing inflorescences (1-1.5 cm) | 51.5493 | 44.9324 | 50.6537 | 53.3429 |
ROO | Roots from the seedlings (10 cm shoot stage) | 29.8722 | 30.4462 | 31.7541 | 32.3886 |
NOD | Developing tillers at six leaf stage, 3rd internode | 46.1314 | 57.1316 | 62.5985 | 145.314 |
CAR5 | Developing grain, bracts removed (5 DPA) | 50.5302 | 56.137 | 47.9177 | 50.0534 |
CAR15 | Developing grain, bracts removed (15 DPA) | 16.9393 | 16.1752 | 17.117 | 41.0121 |
CDS Structure of MLOC_80801
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_80801.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g05280.1 |
+3 |
2e-93 |
285 |
138/147 (94%) |
13105.m00547 protein zinc finger family protein, putative, expressed |
TAIR PP10 |
AT3G47990.1 |
+3 |
4e-78 |
244 |
115/147 (78%) |
| Symbols: SIS3 | SUGAR-INSENSITIVE 3 | chr3:17713367-17716051 REVERSE LENGTH=358 |