- Predicted Gene MLOC_80800
MLOC_80800 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_80800_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_80800_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 5.43078 | 5.42536 | 5.61578 | 5.69246 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.07461 | 19.5976 | 12.6542 | 10.325 |
INF1 | Young developing inflorescences (5mm) | 0 | 0.0680395 | 0.0352107 | 0.0577243 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0631263 | 0 | 0.0721021 | 0.0895035 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.07587 | 2.4505 | 3.31203 | 2.91013 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.585764 | 0.204354 | 0.769886 | 0.834641 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.159179 | 0.377962 | 0.574882 | 0.416781 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0975759 | 0.087971 | 0.0348055 | 0.230144 |
CDS Structure of MLOC_80800
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_80800.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g40250.1 |
-3 |
4e-114 |
340 |
195/284 (69%) |
13107.m04182 protein sex determination protein tasselseed-2, putative, expressed |
TAIR PP10 |
AT3G26770.1 |
-3 |
3e-74 |
237 |
131/271 (48%) |
NAD(P)-binding Rossmann-fold superfamily protein | chr3:9845494-9847079 FORWARD LENGTH=306 |