- Predicted Gene MLOC_80738
MLOC_80738 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 99.232 | 61.3923 | 66.8735 | 69.7932 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 54.9947 | 54.024 | 52.778 | 44.6247 |
INF1 | Young developing inflorescences (5mm) | 41.0959 | 55.5362 | 59.5203 | 39.8854 |
INF2 | Developing inflorescences (1-1.5 cm) | 39.4199 | 41.1719 | 43.5566 | 43.5452 |
ROO | Roots from the seedlings (10 cm shoot stage) | 78.5773 | 66.1295 | 53.5892 | 77.6006 |
NOD | Developing tillers at six leaf stage, 3rd internode | 50.4947 | 52.7219 | 40.8344 | 164.799 |
CAR5 | Developing grain, bracts removed (5 DPA) | 50.4897 | 50.5929 | 50.5893 | 48.1539 |
CAR15 | Developing grain, bracts removed (15 DPA) | 10.4696 | 10.1604 | 9.77726 | 21.5 |
CDS Structure of MLOC_80738
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_80738.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g29620.1 |
-2 |
1e-136 |
401 |
189/220 (86%) |
13107.m02977 protein OsSCP39 - Putative Serine Carboxypeptidase homologue, expressed |
TAIR PP10 |
AT3G10410.1 |
-2 |
5e-106 |
322 |
147/206 (71%) |
| Symbols: SCPL49, CPY | SERINE CARBOXYPEPTIDASE-LIKE 49 | chr3:3235518-3238063 REVERSE LENGTH=516 |