MLOC_80715 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.866415.424512.448414.4609
LEAShoots from the seedlings (10 cm shoot stage)14.21049.907467.7783710.5384
INF1Young developing inflorescences (5mm)35.567734.178831.105631.3956
INF2Developing inflorescences (1-1.5 cm)43.328738.893334.736347.8502
ROORoots from the seedlings (10 cm shoot stage)3.406778.11626.2879311.42
NODDeveloping tillers at six leaf stage, 3rd internode3.980075.483614.3424821.5149
CAR5Developing grain, bracts removed (5 DPA)31.712528.596627.676832.2981
CAR15Developing grain, bracts removed (15 DPA)44.961141.58240.0387107.185



CDS Structure of MLOC_80715






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_80715.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371604NoneNoneNoneNone
MLOC_80715.2CUST_18490_PI427708080AvailableAvailablecontig_92179 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g29430.1 +3 0.0 1575 968/1619 (60%) 13106.m03039 protein cytidine and deoxycytidylate deaminase zinc-binding region family protein, expressed
TAIR PP10 AT1G68720.1 +3 3e-108 378 347/1202 (29%) | Symbols: TADA, ATTADA | tRNA arginine adenosine deaminase | chr1:25804547-25808820 FORWARD LENGTH=1307