- Predicted Gene MLOC_80700
MLOC_80700 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_80700_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_80700_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.697824 | 0.230676 | 0.30048 | 0.342817 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0.108399 | 0 | 0.0754806 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 10.0698 | 8.58182 | 5.33302 | 8.13941 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 0 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0 | 0 | 0 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_80700
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_80700.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g06260.1 |
+3 |
6e-85 |
259 |
160/215 (74%) |
13112.m00638 protein harpin-induced protein 1 domain containing protein, expressed |
TAIR PP10 |
AT5G22200.1 |
+3 |
2e-45 |
157 |
87/185 (47%) |
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr5:7355688-7356871 FORWARD LENGTH=210 |