MLOC_80698 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains126.581112.982114.61131.453
LEAShoots from the seedlings (10 cm shoot stage)88.759177.35771.868775.5995
INF1Young developing inflorescences (5mm)125.612132.261130.897116.565
INF2Developing inflorescences (1-1.5 cm)114.918132.118141.173149.021
ROORoots from the seedlings (10 cm shoot stage)87.9819104.53100.288144.202
NODDeveloping tillers at six leaf stage, 3rd internode69.286475.871266.2398277.757
CAR5Developing grain, bracts removed (5 DPA)143.714141.947135.915146.066
CAR15Developing grain, bracts removed (15 DPA)48.704344.541544.2517109.909



CDS Structure of MLOC_80698






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK248419.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248419.1CUST_18559_PI427708080NoneNoneNone
MLOC_46504.1NoneAvailableNonecontig_291378 (Mapped)
MLOC_70783.3NoneAvailableNonecontig_58542 (Mapped)
MLOC_80698.1NoneAvailableAvailablecontig_92286 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----