MLOC_80687 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains40.798648.666551.659946.8834
LEAShoots from the seedlings (10 cm shoot stage)32.35414.161513.952217.7624
INF1Young developing inflorescences (5mm)1.327981.333261.090351.06284
INF2Developing inflorescences (1-1.5 cm)0.8277910.814850.6334470.83562
ROORoots from the seedlings (10 cm shoot stage)77.965975.288565.825191.567
NODDeveloping tillers at six leaf stage, 3rd internode69.078955.718223.1654173.829
CAR5Developing grain, bracts removed (5 DPA)10.157411.007710.607310.0843
CAR15Developing grain, bracts removed (15 DPA)2.995412.169152.675875.8829



CDS Structure of MLOC_80687






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_80687.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252898.1NoneNoneNoneNone
MLOC_80687.1CUST_18489_PI427708080AvailableAvailablecontig_92179 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g07440.3 -1 0.0 1059 510/552 (92%) 13111.m09204 protein plant neutral invertase domain containing protein, expressed
TAIR PP10 AT4G09510.1 -1 0.0 845 409/557 (73%) | Symbols: CINV2 | cytosolic invertase 2 | chr4:6021312-6023310 REVERSE LENGTH=558