MLOC_80672 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.078461.483961.199951.62252
LEAShoots from the seedlings (10 cm shoot stage)3.014840.6072270.7791591.20453
INF1Young developing inflorescences (5mm)9.5234516.25968.4569111.4396
INF2Developing inflorescences (1-1.5 cm)8.228759.994898.2268711.0062
ROORoots from the seedlings (10 cm shoot stage)9.945768.699017.2352810.3318
NODDeveloping tillers at six leaf stage, 3rd internode0.1045810.6940820.08888051.6112
CAR5Developing grain, bracts removed (5 DPA)7.9387210.48439.8772210.7238
CAR15Developing grain, bracts removed (15 DPA)1.248410.4073941.057392.27562



CDS Structure of MLOC_80672






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_80672.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252122.1NoneNoneNoneNone
MLOC_80672.3CUST_18488_PI427708080AvailableAvailablecontig_92048 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g14010.2 -1 0.0 1000 475/557 (85%) 13103.m01635 protein glycosyl hydrolase family 10 protein, putative, expressed
TAIR PP10 AT4G38650.1 -1 0.0 609 292/530 (55%) Glycosyl hydrolase family 10 protein | chr4:18063377-18065769 FORWARD LENGTH=562