- Predicted Gene MLOC_80672
MLOC_80672 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.07846 | 1.48396 | 1.19995 | 1.62252 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.01484 | 0.607227 | 0.779159 | 1.20453 |
INF1 | Young developing inflorescences (5mm) | 9.52345 | 16.2596 | 8.45691 | 11.4396 |
INF2 | Developing inflorescences (1-1.5 cm) | 8.22875 | 9.99489 | 8.22687 | 11.0062 |
ROO | Roots from the seedlings (10 cm shoot stage) | 9.94576 | 8.69901 | 7.23528 | 10.3318 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.104581 | 0.694082 | 0.0888805 | 1.6112 |
CAR5 | Developing grain, bracts removed (5 DPA) | 7.93872 | 10.4843 | 9.87722 | 10.7238 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.24841 | 0.407394 | 1.05739 | 2.27562 |
CDS Structure of MLOC_80672
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_80672.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g14010.2 |
-1 |
0.0 |
1000 |
475/557 (85%) |
13103.m01635 protein glycosyl hydrolase family 10 protein, putative, expressed |
TAIR PP10 |
AT4G38650.1 |
-1 |
0.0 |
609 |
292/530 (55%) |
Glycosyl hydrolase family 10 protein | chr4:18063377-18065769 FORWARD LENGTH=562 |