MLOC_80666 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.0282593000.0194669
LEAShoots from the seedlings (10 cm shoot stage)1.33390.9854732.827391.47427
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_80666






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_80666.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371327NoneNoneNoneNone
MLOC_80666.1CUST_18487_PI427708080AvailableAvailablecontig_92048 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g35950.1 -3 0.0 645 339/477 (71%) 13110.m03243 protein transferase family protein, putative, expressed
TAIR PP10 AT5G17540.1 -3 5e-144 427 241/441 (55%) HXXXD-type acyl-transferase family protein | chr5:5782061-5783682 REVERSE LENGTH=461