MLOC_80643 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.3085116.497310.92128.75921
LEAShoots from the seedlings (10 cm shoot stage)6.992958.751578.976565.34242
INF1Young developing inflorescences (5mm)1.518681.409371.633250.91745
INF2Developing inflorescences (1-1.5 cm)0.3270750.186260.7442920.29674
ROORoots from the seedlings (10 cm shoot stage)7.3520118.045719.871913.7303
NODDeveloping tillers at six leaf stage, 3rd internode9.787438.960578.3988824.5572
CAR5Developing grain, bracts removed (5 DPA)6.054963.985033.465463.31574
CAR15Developing grain, bracts removed (15 DPA)11.822811.02088.9951217.6817



CDS Structure of MLOC_80643






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK248174.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248174.1CUST_7951_PI427708086NoneNoneNone
MLOC_41570.1NoneAvailableNonecontig_2595554 (Not mapped)
MLOC_42292.1NoneAvailableNonecontig_2635858 (Not mapped)
MLOC_47703.1NoneAvailableNonecontig_310720 (Mapped)
MLOC_51579.3NoneAvailableNonecontig_369741 (Mapped)
MLOC_76644.1NoneAvailableNonecontig_72176 (Mapped)
MLOC_80643.3NoneAvailableAvailablecontig_91883 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----