- Predicted Gene MLOC_80585
MLOC_80585 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_80585_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_80585_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.10313 | 0.166007 | 0.379232 | 0.172665 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.46519 | 0.0845179 | 0.145822 | 0.18812 |
INF1 | Young developing inflorescences (5mm) | 0.0582899 | 0.167473 | 0.140054 | 0.0943461 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.572258 | 0.325007 | 0.274095 | 0.40894 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.297459 | 0.371861 | 0.273596 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0339918 | 0.176299 | 0.0774219 | 0.424343 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.570366 | 0.409755 | 0.56695 | 0.41587 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.508543 | 0.386873 | 0.415119 | 0.907207 |
CDS Structure of MLOC_80585
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_80585.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g54380.1 |
-1 |
1e-17 |
76 |
36/48 (75%) |
13101.m05712 protein PPR repeat domain containing protein, putative, expressed |
TAIR PP10 |
AT2G27800.1 |
-1 |
8e-12 |
61 |
27/48 (56%) |
Tetratricopeptide repeat (TPR)-like superfamily protein | chr2:11849789-11851351 REVERSE LENGTH=442 |