- Predicted Gene MLOC_80571
MLOC_80571 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_80571_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_80571_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 4.97462 | 3.24641 | 4.53743 | 3.75333 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 23.8586 | 26.3093 | 29.3711 | 19.1682 |
INF1 | Young developing inflorescences (5mm) | 0.0911419 | 0 | 0.113823 | 0.102661 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0.06247 | 0.036913 | 0.0629899 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.69769 | 2.8621 | 3.39946 | 3.0144 |
NOD | Developing tillers at six leaf stage, 3rd internode | 110.84 | 114.919 | 155.623 | 275.244 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.36692 | 10.7959 | 8.76778 | 9.47665 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.630144 | 0.395667 | 0.507021 | 1.29773 |
CDS Structure of MLOC_80571
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_80571.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g60509.2 |
-3 |
1e-104 |
314 |
177/214 (83%) |
13103.m06636 protein expressed protein |
TAIR PP10 |
AT3G55120.1 |
-3 |
6e-68 |
219 |
118/211 (56%) |
| Symbols: TT5, A11, CFI | Chalcone-flavanone isomerase family protein | chr3:20430248-20431415 REVERSE LENGTH=246 |