MLOC_80552 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.400951.037499.435430
LEAShoots from the seedlings (10 cm shoot stage)7.0551.939478.381140
INF1Young developing inflorescences (5mm)01.967471.244570
INF2Developing inflorescences (1-1.5 cm)0.7589310.7406600
ROORoots from the seedlings (10 cm shoot stage)45.440913.89236.584580
NODDeveloping tillers at six leaf stage, 3rd internode4.386382.280323.032140
CAR5Developing grain, bracts removed (5 DPA)1.001541.793952.13740
CAR15Developing grain, bracts removed (15 DPA)1.04321.128141.576270



CDS Structure of MLOC_80552






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK365200
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365200CUST_24875_PI427708080NoneNoneNone
MLOC_2454.1NoneAvailableNonecontig_1217746 (Not mapped)
MLOC_25048.1NoneAvailableNonecontig_16682 (Mapped)
MLOC_25921.2NoneAvailableNonecontig_1722065 (Not mapped)
MLOC_46704.1NoneAvailableNonecontig_294484 (Not mapped)
MLOC_62449.1NoneAvailableAvailablecontig_46584 (Not mapped)
MLOC_76140.1NoneAvailableNonecontig_702681 (Not mapped)
MLOC_79259.1NoneAvailableNonecontig_841611 (Not mapped)
MLOC_80552.1NoneAvailableNonecontig_912847 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----