- Predicted Gene MLOC_80542
MLOC_80542 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.71511 | 1.0937 | 0.838543 | 1.50314 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0.500538 | 0 | 0.573975 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0.0619982 | 0.207842 | 0.176343 |
| INF2 | Developing inflorescences (1-1.5 cm) | 17.3674 | 0.158191 | 14.7264 | 11.1533 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.07416 | 5.07187 | 0.95582 | 5.56396 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.140009 | 0.214434 | 0.209637 | 0.68005 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0 | 0 | 0 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 57.2754 | 44.9134 | 38.8238 | 129.062 |
CDS Structure of MLOC_80542
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_80542.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g46600.1 |
-1 |
6e-30 |
110 |
53/67 (79%) |
13101.m04791 protein seed maturation protein PM41, putative, expressed |
| TAIR PP10 |
AT2G21820.1 |
-1 |
3e-19 |
81 |
36/54 (67%) |
unknown protein; Has 45 Blast hits to 45 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:9302983-9303219 REVERSE LENGTH=78 |