MLOC_80483 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.34277.701719.264328.44169
LEAShoots from the seedlings (10 cm shoot stage)7.994387.1701310.08665.83397
INF1Young developing inflorescences (5mm)19.575921.756918.755216.0652
INF2Developing inflorescences (1-1.5 cm)19.115621.752819.514520.8005
ROORoots from the seedlings (10 cm shoot stage)13.091711.27411.224910.6807
NODDeveloping tillers at six leaf stage, 3rd internode4.363174.103859.4446111.4929
CAR5Developing grain, bracts removed (5 DPA)8.1321111.638411.03599.37075
CAR15Developing grain, bracts removed (15 DPA)3.043383.222032.806936.93511



CDS Structure of MLOC_80483






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_80483.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_80483.1CUST_10744_PI427708083AvailableAvailablecontig_90755 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g62860.1 +3 2e-14 65 31/37 (84%) 13101.m06742 protein oxidoreductase, aldo/keto reductase family protein, putative, expressed
TAIR PP10None-----