MLOC_80472 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3894040.2343070.4963390.339853
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)000.0449980.0401865
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)1.163690.2703510.4788720.485543
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_80472






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_80472.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_80472.1CUST_10743_PI427708083AvailableAvailablecontig_90688 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g02230.1 +3 1e-118 360 168/231 (73%) 13108.m00160 protein FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed
TAIR PP10 AT5G56470.1 +3 5e-89 271 128/235 (54%) FAD-dependent oxidoreductase family protein | chr5:22869060-22869958 FORWARD LENGTH=252