MLOC_80471 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7464040.9173821.434990.981814
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)00.13528900.137537
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)1.777631.8674402.73552
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_80471






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_80471.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_80471.1CUST_10742_PI427708083AvailableAvailablecontig_90688 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g02230.1 +2 4e-38 137 80/105 (76%) 13108.m00160 protein FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed
TAIR PP10 AT2G46760.1 +2 9e-28 108 61/105 (58%) D-arabinono-1,4-lactone oxidase family protein | chr2:19213028-19215166 REVERSE LENGTH=603