- Predicted Gene MLOC_80445
MLOC_80445 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_80445_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_80445_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 6.87122 | 7.67239 | 6.82391 | 7.51779 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 8.91391 | 6.75946 | 6.66899 | 6.55107 |
INF1 | Young developing inflorescences (5mm) | 20.4938 | 22.9302 | 23.19 | 19.41 |
INF2 | Developing inflorescences (1-1.5 cm) | 16.5866 | 19.2186 | 20.0865 | 20.86 |
ROO | Roots from the seedlings (10 cm shoot stage) | 8.18533 | 10.5796 | 9.16188 | 12.7292 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.50118 | 2.99102 | 3.01672 | 10.2845 |
CAR5 | Developing grain, bracts removed (5 DPA) | 9.45135 | 9.63821 | 9.463 | 9.64761 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.88895 | 2.67519 | 1.73903 | 5.1836 |
CDS Structure of MLOC_80445
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_80445.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g05420.1 |
+3 |
0.0 |
686 |
362/440 (82%) |
13112.m00546 protein calmodulin-binding protein, putative, expressed |
TAIR PP10 |
AT3G52870.1 |
+3 |
2e-158 |
469 |
254/408 (62%) |
IQ calmodulin-binding motif family protein | chr3:19593365-19595686 REVERSE LENGTH=456 |