MLOC_80438 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains111.97394.654791.4751101.372
LEAShoots from the seedlings (10 cm shoot stage)27.880519.075824.655421.067
INF1Young developing inflorescences (5mm)34.466840.612433.510530.957
INF2Developing inflorescences (1-1.5 cm)22.926229.022725.918528.6268
ROORoots from the seedlings (10 cm shoot stage)62.525169.836861.997385.2262
NODDeveloping tillers at six leaf stage, 3rd internode41.007331.367120.436598.9204
CAR5Developing grain, bracts removed (5 DPA)66.585667.573870.474666.6228
CAR15Developing grain, bracts removed (15 DPA)19.507619.199116.625343.934



CDS Structure of MLOC_80438






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK364730
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364730CUST_20959_PI427708080NoneNoneNone
MLOC_80438.1NoneAvailableAvailablecontig_90524 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----