- Predicted Gene MLOC_80384
MLOC_80384 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_80384_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_80384_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 8.92886 | 6.86692 | 7.23797 | 7.34107 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.36127 | 6.0641 | 6.96848 | 4.68947 |
INF1 | Young developing inflorescences (5mm) | 2.0269 | 2.26571 | 2.65087 | 2.10427 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.51882 | 2.32192 | 2.27778 | 2.41205 |
ROO | Roots from the seedlings (10 cm shoot stage) | 11.2793 | 5.96358 | 7.38929 | 7.17901 |
NOD | Developing tillers at six leaf stage, 3rd internode | 12.7048 | 15.0622 | 23.3359 | 42.7212 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.43217 | 5.68335 | 5.44615 | 5.55946 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.488881 | 0.85866 | 0.828275 | 1.9426 |
CDS Structure of MLOC_80384
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_80384.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g28730.1 |
+1 |
8e-174 |
501 |
250/314 (80%) |
13109.m02835 protein gibberellin receptor GID1L2, putative, expressed |
TAIR PP10 |
AT2G03550.1 |
+1 |
6e-67 |
223 |
130/315 (41%) |
alpha/beta-Hydrolases superfamily protein | chr2:1077080-1078018 FORWARD LENGTH=312 |