MLOC_80354 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.479322.398320.222514.9785
LEAShoots from the seedlings (10 cm shoot stage)37.216462.900760.806635.2654
INF1Young developing inflorescences (5mm)12.2612.026411.01178.15835
INF2Developing inflorescences (1-1.5 cm)11.547611.07828.754769.70036
ROORoots from the seedlings (10 cm shoot stage)26.467628.093724.54125.3218
NODDeveloping tillers at six leaf stage, 3rd internode20.505823.505521.812460.2038
CAR5Developing grain, bracts removed (5 DPA)9.137469.7761810.91537.56799
CAR15Developing grain, bracts removed (15 DPA)4.269733.868223.716127.56109



CDS Structure of MLOC_80354






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK364073
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364073CUST_20826_PI427708080NoneNoneNone
MLOC_19780.1NoneAvailableNonecontig_158642 (Mapped)
MLOC_46950.1NoneAvailableNonecontig_298336 (Mapped)
MLOC_80354.1NoneAvailableAvailablecontig_90020 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----