MLOC_80311 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1671510.1770580.2384530.247693
LEAShoots from the seedlings (10 cm shoot stage)5.681447.6512814.09067.96066
INF1Young developing inflorescences (5mm)0.546020.2539911.313150.655863
INF2Developing inflorescences (1-1.5 cm)4.246781.096663.19133.18517
ROORoots from the seedlings (10 cm shoot stage)1.406661.299241.192341.6441
NODDeveloping tillers at six leaf stage, 3rd internode18.399122.327143.981684.4138
CAR5Developing grain, bracts removed (5 DPA)0.752460.4013380.8339590.71789
CAR15Developing grain, bracts removed (15 DPA)1.652211.63781.732734.40097



CDS Structure of MLOC_80311






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_80311.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_80311.2CUST_13400_PI427708083AvailableAvailablecontig_89740 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g03034.2 +3 2e-116 352 175/252 (69%) 13103.m00280 protein flavonol synthase/flavanone 3-hydroxylase, putative, expressed
TAIR PP10 AT5G24530.1 +3 1e-78 255 129/253 (51%) | Symbols: DMR6 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr5:8378964-8383154 FORWARD LENGTH=341