MLOC_80288 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains18.40138.995733.24030
LEAShoots from the seedlings (10 cm shoot stage)13.401437.678335.97870
INF1Young developing inflorescences (5mm)11.507916.799520.41690
INF2Developing inflorescences (1-1.5 cm)14.739311.510816.73860
ROORoots from the seedlings (10 cm shoot stage)23.610134.809936.58410
NODDeveloping tillers at six leaf stage, 3rd internode17.47125.675511.6170
CAR5Developing grain, bracts removed (5 DPA)21.935225.302224.14540
CAR15Developing grain, bracts removed (15 DPA)17.194716.358614.20280



CDS Structure of MLOC_80288






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK251444.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251444.1CUST_19013_PI427708080NoneNoneNone
MLOC_27982.1NoneAvailableNonecontig_188054 (Mapped)
MLOC_28695.1NoneAvailableNonecontig_194039 (Not mapped)
MLOC_32450.1NoneAvailableNonecontig_228741 (Not mapped)
MLOC_35516.1NoneAvailableNonecontig_2495898 (Not mapped)
MLOC_41565.1NoneAvailableNonecontig_2595115 (Mapped)
MLOC_41725.1NoneAvailableNonecontig_2603074 (Not mapped)
MLOC_41927.1NoneAvailableNonecontig_2614004 (Not mapped)
MLOC_42150.1NoneAvailableNonecontig_2627146 (Mapped)
MLOC_66041.2NoneAvailableAvailablecontig_51038 (Mapped)
MLOC_80288.1NoneAvailableNonecontig_89632 (Mapped)
MLOC_892.1NoneAvailableNonecontig_107359 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----