MLOC_80280 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.119919.264121.41090
LEAShoots from the seedlings (10 cm shoot stage)33.66056.711219.683140
INF1Young developing inflorescences (5mm)29.093428.396243.04630
INF2Developing inflorescences (1-1.5 cm)22.782228.040719.35580
ROORoots from the seedlings (10 cm shoot stage)10.722421.27429.24780
NODDeveloping tillers at six leaf stage, 3rd internode5.622644.9222110.26950
CAR5Developing grain, bracts removed (5 DPA)16.294611.782918.67130
CAR15Developing grain, bracts removed (15 DPA)8.1256303.971280



CDS Structure of MLOC_80280






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK358539
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358539CUST_19980_PI427708080NoneNoneNone
MLOC_39763.1NoneAvailableNonecontig_2554626 (Mapped)
MLOC_41499.1NoneAvailableNonecontig_2591354 (Not mapped)
MLOC_61639.1NoneAvailableAvailablecontig_45716 (Mapped)
MLOC_80280.1NoneAvailableNonecontig_896184 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----