MLOC_80253 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.58292.198123.163212.85133
LEAShoots from the seedlings (10 cm shoot stage)18.294523.27834.994922.4936
INF1Young developing inflorescences (5mm)2.161753.125773.653433.12513
INF2Developing inflorescences (1-1.5 cm)1.924612.844192.337433.17589
ROORoots from the seedlings (10 cm shoot stage)0.4076990.6054460.1120660.712767
NODDeveloping tillers at six leaf stage, 3rd internode7.4286512.300827.813146.0178
CAR5Developing grain, bracts removed (5 DPA)3.057213.780324.074374.43307
CAR15Developing grain, bracts removed (15 DPA)0.1491530.281710.2594020.698307



CDS Structure of MLOC_80253






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_80253.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374604NoneNoneNoneNone
MLOC_80253.1CUST_6775_PI427708080AvailableAvailablecontig_89507 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g45340.1 +2 6e-70 221 105/122 (86%) 13106.m04772 protein peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed
TAIR PP10 AT5G45680.1 +2 2e-57 187 88/123 (72%) | Symbols: ATFKBP13, FKBP13 | FK506-binding protein 13 | chr5:18530894-18532128 FORWARD LENGTH=208