- Predicted Gene MLOC_80252
MLOC_80252 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0 | 1.07186 | 1.01757 | 0 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.17741 | 0.91569 | 0.631123 | 0.568168 |
| INF1 | Young developing inflorescences (5mm) | 2.91925 | 4.12338 | 3.82139 | 3.18352 |
| INF2 | Developing inflorescences (1-1.5 cm) | 4.79994 | 4.77971 | 4.27018 | 5.21044 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.63054 | 1.64678 | 0.753604 | 0.6987 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.412882 | 0.338109 | 0.0676889 | 4.41006 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.1946 | 0.861693 | 0.733405 | 0.820564 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.0317814 | 0.119668 | 0.170439 | 0.00569994 |
CDS Structure of MLOC_80252
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_80252.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g50330.1 |
-2 |
1e-137 |
430 |
204/259 (79%) |
13102.m05711 protein RNA-dependent RNA polymerase, putative, expressed |
| TAIR PP10 |
AT1G14790.1 |
-2 |
3e-88 |
305 |
154/261 (59%) |
| Symbols: RDR1, ATRDRP1 | RNA-dependent RNA polymerase 1 | chr1:5094317-5097817 REVERSE LENGTH=1107 |