MLOC_80241 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.150816.62113.87640
LEAShoots from the seedlings (10 cm shoot stage)26.265520.670816.3880
INF1Young developing inflorescences (5mm)14.46114.771526.28240
INF2Developing inflorescences (1-1.5 cm)19.794617.56116.33370
ROORoots from the seedlings (10 cm shoot stage)11.97018.3541111.70640
NODDeveloping tillers at six leaf stage, 3rd internode17.463521.16427.77130
CAR5Developing grain, bracts removed (5 DPA)10.967818.280616.66650
CAR15Developing grain, bracts removed (15 DPA)7.119335.512454.735060



CDS Structure of MLOC_80241






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK354022
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354022CUST_23646_PI427708080NoneNoneNone
MLOC_1089.1NoneAvailableNonecontig_109193 (Not mapped)
MLOC_32070.1NoneAvailableNonecontig_2249708 (Not mapped)
MLOC_32324.1NoneAvailableNonecontig_2276088 (Not mapped)
MLOC_57522.1NoneAvailableAvailablecontig_418290 (Not mapped)
MLOC_77737.1NoneAvailableNonecontig_770463 (Not mapped)
MLOC_79394.2NoneAvailableNonecontig_84824 (Mapped)
MLOC_80241.1NoneAvailableNonecontig_894158 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----