MLOC_80231 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains37.458817.369631.408324.0679
LEAShoots from the seedlings (10 cm shoot stage)17.747139.6146022.9002
INF1Young developing inflorescences (5mm)46.651855.248671.268643.0703
INF2Developing inflorescences (1-1.5 cm)40.699651.189563.175847.7697
ROORoots from the seedlings (10 cm shoot stage)85.831914.419732.554330.7582
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)26.916234.166121.66523.9552
CAR15Developing grain, bracts removed (15 DPA)2.946036.508659.0731713.5227



CDS Structure of MLOC_80231






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_80231.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_80231.1NoneAvailableAvailablecontig_89364 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g07820.2 +3 5e-15 67 30/33 (91%) 13109.m00638 protein exosome complex exonuclease, putative, expressed
TAIR PP10None-----