MLOC_80162 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.6438.404468.489929.81075
LEAShoots from the seedlings (10 cm shoot stage)1.437340.6443270.5779760.747663
INF1Young developing inflorescences (5mm)1.193870.8220770.7338690.884605
INF2Developing inflorescences (1-1.5 cm)0.3922540.6516040.581120.756898
ROORoots from the seedlings (10 cm shoot stage)25.401822.415813.992727.9477
NODDeveloping tillers at six leaf stage, 3rd internode1.225921.169921.071143.53246
CAR5Developing grain, bracts removed (5 DPA)0.2477190.2883650.09944020.258111
CAR15Developing grain, bracts removed (15 DPA)0.0478454000.165097



CDS Structure of MLOC_80162






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_80162.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366220NoneNoneNoneNone
MLOC_80162.3CUST_6772_PI427708080AvailableAvailablecontig_89042 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g08072.1 +2 0.0 773 381/561 (68%) 13109.m00665 protein glycosyl hydrolases, putative, expressed
TAIR PP10 AT1G55120.1 +2 5e-174 514 264/547 (48%) | Symbols: ATFRUCT5, AtcwINV3, FRUCT5 | beta-fructofuranosidase 5 | chr1:20566617-20569165 FORWARD LENGTH=594