- Predicted Gene MLOC_80158
MLOC_80158 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 315.719 | 257.128 | 266.415 | 302.881 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 99.4265 | 47.803 | 71.1028 | 63.4795 |
| INF1 | Young developing inflorescences (5mm) | 71.9107 | 76.2934 | 70.2453 | 68.8542 |
| INF2 | Developing inflorescences (1-1.5 cm) | 36.8821 | 40.1466 | 45.5564 | 50.127 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 321.344 | 261.623 | 162.653 | 335.878 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 474.707 | 452.15 | 489.515 | 1498.12 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 147.112 | 160.996 | 162.058 | 178.317 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 18.6628 | 15.5958 | 17.5978 | 44.9414 |
CDS Structure of MLOC_80158
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_80158.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g22030.1 |
+3 |
0.0 |
815 |
401/475 (84%) |
13112.m02237 protein serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed |
| TAIR PP10 |
AT4G13930.1 |
+3 |
0.0 |
806 |
396/471 (84%) |
| Symbols: SHM4 | serine hydroxymethyltransferase 4 | chr4:8048013-8050021 REVERSE LENGTH=471 |