MLOC_80137 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.887134.882044.647624.58751
LEAShoots from the seedlings (10 cm shoot stage)5.053720.6518651.321122.09015
INF1Young developing inflorescences (5mm)7.634945.307135.02085.11384
INF2Developing inflorescences (1-1.5 cm)7.083827.117818.196147.95613
ROORoots from the seedlings (10 cm shoot stage)4.64975.866085.019166.77029
NODDeveloping tillers at six leaf stage, 3rd internode5.20116.195553.5686819.0013
CAR5Developing grain, bracts removed (5 DPA)9.642017.343898.510498.01536
CAR15Developing grain, bracts removed (15 DPA)1.175230.9958011.355062.60983



CDS Structure of MLOC_80137






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_80137.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK253110.1NoneNoneNoneNone
MLOC_80137.1CUST_6770_PI427708080AvailableAvailablecontig_88836 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g52860.1 -3 0.0 1388 705/841 (84%) 13104.m05431 protein TKL_IRAK_CrRLK1L-1.9 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed
TAIR PP10 AT1G30570.1 -3 0.0 863 450/811 (55%) | Symbols: HERK2 | hercules receptor kinase 2 | chr1:10828933-10831482 FORWARD LENGTH=849