- Predicted Gene MLOC_80136
MLOC_80136 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 12.62 | 7.86929 | 9.45554 | 8.30432 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.87183 | 3.53878 | 3.73799 | 3.03192 |
| INF1 | Young developing inflorescences (5mm) | 13.9301 | 19.4174 | 21.1899 | 13.3882 |
| INF2 | Developing inflorescences (1-1.5 cm) | 9.31928 | 11.3985 | 8.00531 | 9.94776 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 11.5573 | 9.84835 | 7.40579 | 9.91073 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.33331 | 1.20892 | 3.49176 | 4.13268 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.9816 | 4.13192 | 2.71466 | 3.28788 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.480702 | 0.953606 | 0.231352 | 1.27962 |
CDS Structure of MLOC_80136
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_80136.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g20280.1 |
+1 |
4e-46 |
153 |
74/84 (88%) |
13102.m29150 protein conserved hypothetical protein |
| TAIR PP10 |
AT5G53045.1 |
+1 |
4e-31 |
113 |
53/80 (66%) |
unknown protein; Has 122 Blast hits to 122 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 30; Plants - 41; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). | chr5:21508603-21509538 REVERSE LENGTH=96 |