MLOC_80133 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.624476.712595.321765.93186
LEAShoots from the seedlings (10 cm shoot stage)4.252093.855513.844463.56966
INF1Young developing inflorescences (5mm)10.637811.18889.573479.05704
INF2Developing inflorescences (1-1.5 cm)15.012312.985812.777915.3399
ROORoots from the seedlings (10 cm shoot stage)2.963785.249634.310246.24709
NODDeveloping tillers at six leaf stage, 3rd internode3.56014.847525.3329717.0431
CAR5Developing grain, bracts removed (5 DPA)7.955778.018989.712988.57284
CAR15Developing grain, bracts removed (15 DPA)2.176191.469351.747554.28547



CDS Structure of MLOC_80133






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_80133.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_80133.4CUST_16708_PI427708080AvailableAvailablecontig_88832 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g39520.2 +1 0.0 1362 685/856 (80%) 13102.m04372 protein transposon protein, putative, unclassified, expressed
TAIR PP10 AT1G52520.1 +1 1e-114 373 234/644 (36%) | Symbols: FRS6 | FAR1-related sequence 6 | chr1:19565933-19568248 FORWARD LENGTH=703