MLOC_80125 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.758112.056811.315212.6575
LEAShoots from the seedlings (10 cm shoot stage)0.1743420.4164360.8011310.437778
INF1Young developing inflorescences (5mm)0.09134730.06062430.02134030.056198
INF2Developing inflorescences (1-1.5 cm)00.05347810.08739780.0887823
ROORoots from the seedlings (10 cm shoot stage)2.577851.150911.70331.49612
NODDeveloping tillers at six leaf stage, 3rd internode0.0144536000.000837636
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)000.02156250.0465844



CDS Structure of MLOC_80125






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_80125.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_80125.1CUST_16707_PI427708080AvailableAvailablecontig_88783 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g39300.1 +1 0.0 624 313/435 (72%) 13112.m04065 protein cytochrome P450, putative, expressed
TAIR PP10 AT4G37360.1 +1 7e-113 352 185/433 (43%) | Symbols: CYP81D2 | cytochrome P450, family 81, subfamily D, polypeptide 2 | chr4:17567124-17568858 REVERSE LENGTH=499